Filter prevalence result rows by group pair(s), rank, features,
universe, and optional significance thresholds. Preserves ph_prev_result
class and prev_meta attribute when the input carries them.
Usage
.ph_filter_pairs(
df,
gA,
gB,
ranks = NULL,
features = NULL,
features_regex = FALSE,
group_universe = NULL,
universe_regex = FALSE,
col_rank = "rank",
col_feature = "feature",
col_g1 = "group1",
col_g2 = "group2",
col_groupcol = "group_col",
p_raw_max = NULL,
q_bh_max = NULL,
q_wbh_max = NULL,
passed_only = FALSE,
drop_na = TRUE,
keep_cols = NULL
)